No datasets match
  1. 1.
    decemedip::example.hg19.ref.anc.se
    Subset of hg19.ref.anc.se as a lightweighted example
    rda| rds
    RangedSummarizedExperiment
  2. 2.
    decemedip::example.hg19.ref.cts.se
    Subset of hg19.ref.cts.se as a lightweighted example
    rda| rds
    RangedSummarizedExperiment
  3. 3.
    decemedip::example.pdx.counts.anc.se
    Subset of pdx.counts.anc.se as a lightweighted example
    rda| rds
    RangedSummarizedExperiment
  4. 4.
    decemedip::example.pdx.counts.cts.se
    Subset of pdx.counts.cts.se as a lightweighted example
    rda| rds
    RangedSummarizedExperiment
  5. 5.
    decemedip::hg19.ref.anc.se
    Hg19 genomic information of anchor CpGs (i.e., all-tissue unmethylated/methylation probes) inferred from DNA methylation atlas published by Moss 2018 Nat. Commun. (https://www.nature.com/articles/s41467-018-07466-6). Used as default in 'decemedip'.
    rda| rds
    RangedSummarizedExperiment
  6. 6.
    decemedip::hg19.ref.cts.se
    Hg19 genomic information of cell-type-specific marker CpGs inferred from DNA methylation atlas published by Moss 2018 Nat. Commun. (https://www.nature.com/articles/s41467-018-07466-6).
    rda| rds
    RangedSummarizedExperiment
  7. 7.
    decemedip::hg38.ref.anc.se
    Hg38 genomic information of cell-type-specific marker CpGs inferred from DNA methylation atlas published by Moss 2018 Nat. Commun. (https://www.nature.com/articles/s41467-018-07466-6).
    rda| rds
    RangedSummarizedExperiment
  8. 8.
    decemedip::hg38.ref.cts.se
    Hg38 genomic information of cell-type-specific marker CpGs inferred from DNA methylation atlas published by Moss 2018 Nat. Commun. (https://www.nature.com/articles/s41467-018-07466-6).
    rda| rds
    RangedSummarizedExperiment
  9. 9.
    decemedip::pdx.counts.anc.se
    MeDIP-seq read counts on reference anchor CpGs of 3 PDX samples from Berchuck et al. 2022
    rda| rds
    RangedSummarizedExperiment
  10. 10.
    decemedip::pdx.counts.cts.se
    MeDIP-seq read counts on reference cell type-specific CpGs of 3 PDX samples from Berchuck et al. 2022
    rda| rds
    RangedSummarizedExperiment
  11. 11.
    vmrseq::cell_1
    cell_1
    csv| xlsx| json| ndjson| rda| rds
    data.table|10000 x 5
  12. 12.
    vmrseq::cell_2
    cell_2
    csv| xlsx| json| ndjson| rda| rds
    data.table|10000 x 5
  13. 13.
    vmrseq::cell_3
    cell_3
    csv| xlsx| json| ndjson| rda| rds
    data.table|10000 x 5
  14. 14.
    vmrseq::toy.gr
    toy.gr
    rda| rds
    GRanges
  15. 15.
    vmrseq::toy.results
    toy.results
    rda| rds
    list